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rs12048704 chr1:207864057 C>A

Sequence
tcacctccgttccccctgctactt[C/A]cagcaagtggtttcctcctgctac
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
FOXK2_HUMAN ATF7_HUMAN TBX21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN n/a 1.18 1.004.2·10-5 1.33 n/a n/a
ATF7_HUMAN -1.82 1.61 1.009.0·10-5 1.33 n/a n/a
TBX21_HUMAN -0.04 1.80 1.000.03 1.42 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta Artery_Tibial Heart_Atrial_Appendage Lung Nerve_Tibial

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