rs12051243 chr16:27203137 G>T
- Sequence
catcaaagcaaaggtggcaggagt[G/T]tgtcccctggccacttgccttctc
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | -0.27 | 0.75 | 2.00 | |||
| HEK293 (embryonic kidney) | -0.20 | 0.60 | 1.92 |
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Motif analysis
No data available
Genetic associations
GRASP sporadic creutzfeldt-jakob disease, triglycerides change with statins, variant creutzfeldt-jakob disease
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Cerebellum, Brain_Hippocampus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Testis, Thyroid, Whole_Blood