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rs12069441 chr1:6204715 T>C

Sequence
ttagccgggcatggtggtgcgtgg[T/C]tgtagtcccagctacttgggaggc
ASB in cell types
K562 (myelogenous leukemia) HEK293 (embryonic kidney)
ASB for transcription factors
ZBT17_HUMAN ZN335_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZBT17_HUMAN n/a 2.35 1.008.6·10-4 1.33 n/a No Hit
ZN335_HUMAN -2.02 2.08 1.000.02 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Adrenal_Gland Artery_Aorta Artery_Tibial Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Lung Minor_Salivary_Gland Muscle_Skeletal Nerve_Tibial Pancreas Pituitary Prostate Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Small_Intestine_Terminal_Ileum Spleen Stomach Testis Thyroid Whole_Blood

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