rs12092734 chr1:11908349 T>C
- Sequence
atgtaaagtgtattatagaacaaa[T/C]gcgagttacggtttttcagctttt
- ASB in cell types
- HCT-116 (colon carcinoma) K562 (myelogenous leukemia) D341 Med (medulloblastoma) liver
- ASB for transcription factors
- NDF1_HUMAN JUND_HUMAN ZMIZ1_HUMAN GCR_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NDF1_HUMAN | 1.46 | -0.70 | 1.42 | n/a | No Hit | |||
| JUND_HUMAN | 1.47 | -0.27 | 1.62 | n/a | No Hit | |||
| ZMIZ1_HUMAN | 2.56 | -3.09 | 1.50 | n/a | n/a | |||
| GCR_HUMAN | 1.48 | -0.05 | 1.27 | n/a | No Hit | |||
| SIN3A_HUMAN | 1.96 | -0.46 | 2.17 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Esophagus_Mucosa, Heart_Atrial_Appendage, Lung, Nerve_Tibial, Spleen, Testis, Thyroid, Whole_Blood