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rs12097144 chr1:166514294 T>C

Sequence
ttccaatgggcagtctgctatcaa[T/C]tttatttttattctttaatgcaat
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
ZN317_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN317_HUMAN n/a 2.07 1.000.03 2.00 -2.14 Discordant
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Motif analysis

ZN317_HUMAN Discordant
ZN317_HUMAN pic

Genetic associations

GRASP aortic valve calcium hdl cholesterol ldl cholesterol obesity with early age of onset (age >2) rheumatoid arthritis total cholesterol
GTEx eQTL Colon_Transverse

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