rs12119 chr4:7031944 C>T
- Sequence
tggactttttatgcctgccatacc[C/T]gctaatgctcctcgaggtgcagga
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- EP400_HUMAN HDAC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP400_HUMAN | -3.24 | 2.41 | 2.00 | n/a | n/a | |||
| HDAC1_HUMAN | -0.51 | 1.52 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, birth weight, college completion, fasting blood glucose, height, infant head circumference, total cholesterol change with statins, triglycerides change with statins, years of education
GTEx eQTL Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid