rs12119879 chr1:16636932 G>A
- Sequence
ctggggcacaggaattctagaccc[G/A]tctgggcaacaaagtgagaactcg
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) HepG2 (hepatoblastoma) MCF-7 C4-12 (invasive breast ductal carcinoma)
- ASB for transcription factors
- ZFX_HUMAN ILF3_HUMAN T22D4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFX_HUMAN | 2.57 | n/a | 2.00 | n/a | No Hit | |||
| ILF3_HUMAN | 2.44 | n/a | 2.00 | n/a | n/a | |||
| T22D4_HUMAN | 2.10 | n/a | 1.50 | n/a | n/a |
Items per page:
1 – 3 of 3