ADASTRA v1.6.10
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rs12121078
chr1:202647661
C
>
T
Sequence
gctgatgtagttcttcaccttgac[C/T]gagttccctccccacttcagacct
ASB in cell types
HEK293T (embryonic kidney)
ASB for transcription factors
PRDM9_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PRDM9_HUMAN
-0.09
1.80
1.00
8.6·10
-3
1.33
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
alzheimers disease
,
fasting blood glucose
,
fasting insulin
,
late onset alzheimers disease
,
plasma renin activity
,
variant creutzfeldt-jakob disease
GTEx eQTL
Cells_Cultured_fibroblasts
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)