rs12126260 chr1:110881233 C>T
- Sequence
atccctttctctcacccttccctg[C/T]tccctctctactcacctcctgccc
- ASB in cell types
- HEK293 (embryonic kidney) GM12878 (female B-cells)
- ASB for transcription factors
- FOXK2_HUMAN ZBT17_HUMAN ZN629_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 1.79 | 0.44 | 1.33 | n/a | n/a | |||
| ZBT17_HUMAN | 2.18 | -2.02 | 2.00 | -3.86 | Concordant | |||
| ZN629_HUMAN | 2.21 | n/a | 2.00 | n/a | n/a |
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Motif analysis
