rs12146541 chr11:57741206 G>C
- Sequence
ggttgccagggaggagagtttggc[G/C]gcagatggtggcacacaacattta
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ZBT11_HUMAN MNT_HUMAN FOXK2_HUMAN ZN316_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT11_HUMAN | n/a | 2.31 | 2.00 | n/a | n/a | |||
| MNT_HUMAN | -1.88 | 1.70 | 2.00 | n/a | n/a | |||
| FOXK2_HUMAN | -0.78 | 1.64 | 2.00 | n/a | n/a | |||
| ZN316_HUMAN | -1.06 | 1.76 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Testis, Thyroid, Vagina, Whole_Blood