ADASTRA v1.6.10
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rs12146572
chr11:104332221
A
>
G
Sequence
ttttcttcagggactcagaatctt[A/G]ttcagactatgaagaaccagggtc
ASB in cell types
epithelial cell of prostate
foreskin keratinocyte
H929 (plasma cell myeloma)
Peyer's patch
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
epithelial cell of prostate
-1.29
1.46
1.00
5.1·10
-3
1.00
foreskin keratinocyte
1.19
-3.38
0.03
1.00
2.50
H929 (plasma cell myeloma)
n/a
2.14
1.00
0.04
3.00
Peyer's patch
n/a
1.59
1.00
0.05
1.33
Items per page:
5
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GRASP
total cholesterol
GTEx eQTL
Brain_Cerebellar_Hemisphere
,
Brain_Spinal_cord_cervical_c-1
,
Heart_Atrial_Appendage
,
Nerve_Tibial
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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