rs12149033 chr16:23182361 A>C
- Sequence
cgaggagcgaggctgcgtgggatt[A/C]ctgctggtgctagggcaggcacct
- ASB in cell types
- foreskin keratinocyte GM12878 (female B-cells)
- ASB for transcription factors
- CTCF_HUMAN FOXK2_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.03 | 0.47 | 1.32 | n/a | No Hit | |||
| FOXK2_HUMAN | 1.63 | -1.41 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adrenal_Gland, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Frontal_Cortex_BA9, Heart_Left_Ventricle, Muscle_Skeletal, Pancreas, Testis, Thyroid