rs12186309 chr4:3955688 T>C
- Sequence
tcctggggcggggtcgggacaggg[T/C]gatcctggaagcggggcttcggaa
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- RFX1_HUMAN ZN217_HUMAN CREB1_HUMAN CLOCK_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFX1_HUMAN | 2.89 | n/a | 2.00 | -1.67 | Weak Concordant | |||
| ZN217_HUMAN | 3.01 | n/a | 2.00 | n/a | n/a | |||
| CREB1_HUMAN | 1.92 | 0.33 | 1.78 | n/a | No Hit | |||
| CLOCK_HUMAN | 1.90 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
