rs12199710 chr6:10403947 A>G
- Sequence
cgcctatagtatgggggtctggag[A/G]tgacagcgaccggaaagcatggcg
- ASB in cell types
- GM12878 (female B-cells) foreskin keratinocyte bipolar neuron
- ASB for transcription factors
- CTCF_HUMAN MTA2_HUMAN IKZF1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.03 | 0.26 | 1.35 | 0.39 | Weak Discordant | |||
| MTA2_HUMAN | -1.85 | 1.78 | 1.33 | n/a | n/a | |||
| IKZF1_HUMAN | -0.94 | 1.28 | 1.33 | n/a | No Hit |
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Motif analysis
