rs12228523 chr12:131896278 A>G
- Sequence
ggagactcctgctcgctggcagtc[A/G]gggccgggccggggcacaggcggc
- ASB in cell types
- HepG2 (hepatoblastoma) tibial nerve
- ASB for transcription factors
- CTCF_HUMAN FOXK2_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.30 | 1.74 | 1.17 | 3.70 | Concordant | |||
| FOXK2_HUMAN | 1.84 | -1.73 | 1.33 | n/a | n/a | |||
| ESR1_HUMAN | 1.06 | n/a | 2.50 | n/a | No Hit |
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Motif analysis
