rs12244200 chr10:38526962 T>A
- Sequence
tggacacgattggaatggaataca[T/A]tggaatgaaatggatttgaaagga
- ASB in cell types
- HepG2 (hepatoblastoma) GM12878 (female B-cells) Reh (ATCC CRL-8286) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ETV6_HUMAN CTCF_HUMAN FOXK2_HUMAN EP300_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ETV6_HUMAN | n/a | 2.96 | 4.00 | n/a | n/a | |||
| CTCF_HUMAN | -1.85 | 1.60 | 1.78 | n/a | No Hit | |||
| FOXK2_HUMAN | n/a | 2.23 | 3.00 | n/a | n/a | |||
| EP300_HUMAN | -1.33 | 1.58 | 2.11 | n/a | n/a | |||
| IRF5_HUMAN | -1.84 | 1.88 | 3.00 | n/a | n/a |
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