rs12244202 chr10:38526979 T>C
- Sequence
gaatacattggaatgaaatggatt[T/C]gaaaggaatggactggaatggaat
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) HepG2 (hepatoblastoma) GM12878 (female B-cells)
- ASB for transcription factors
- CTCF_HUMAN ELF1_HUMAN ETV6_HUMAN NCOA3_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.75 | 1.38 | 2.32 | n/a | No Hit | |||
| ELF1_HUMAN | -2.50 | 2.40 | 1.33 | n/a | No Hit | |||
| ETV6_HUMAN | n/a | 2.72 | 4.00 | n/a | n/a | |||
| NCOA3_HUMAN | -3.06 | 2.30 | 2.50 | n/a | n/a | |||
| GCR_HUMAN | n/a | 2.29 | 2.00 | n/a | No Hit |
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