rs12251572 chr10:38527602 A>T
- Sequence
tggacccaatgggatggaatctaa[A/T]ggaatggaatggaatggactcgaa
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) K562 (myelogenous leukemia) HepG2 (hepatoblastoma) GM12878 (female B-cells)
- ASB for transcription factors
- CTCF_HUMAN YBOX1_HUMAN EP300_HUMAN CREB1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.32 | 2.14 | 2.51 | n/a | No Hit | |||
| YBOX1_HUMAN | n/a | 3.04 | 2.33 | n/a | n/a | |||
| EP300_HUMAN | -1.60 | 2.12 | 2.40 | n/a | n/a | |||
| CREB1_HUMAN | n/a | 2.51 | 2.78 | n/a | No Hit | |||
| NCOA3_HUMAN | n/a | 3.03 | 2.50 | n/a | n/a |
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