ADASTRA v1.6.10
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rs122631
chr19:3097183
C
>
A
Sequence
ctagagggtggggccgaggctccc[C/A]ggaaggaaggggctgttgggctgc
ASB in cell types
HepG2 (hepatoblastoma)
keratinocytes
ASB for transcription factors
GABP1_HUMAN
SNAI2_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GABP1_HUMAN
2.12
-1.92
3.8·10
-3
1.00
1.33
n/a
n/a
SNAI2_HUMAN
2.22
n/a
8.3·10
-3
1.00
4.00
n/a
No Hit
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5
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Cells_EBV-transformed_lymphocytes
,
Muscle_Skeletal
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)