rs12278867 chr11:87266921 C>G
- Sequence
ttttctctagcagtacatagttgc[C/G]tcattataggcatggagaaggtga
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
- ASB for transcription factors
- NFIC_HUMAN CEBPB_HUMAN ARI1B_HUMAN ZEB2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIC_HUMAN | n/a | 2.42 | 2.00 | n/a | No Hit | |||
| CEBPB_HUMAN | n/a | 3.53 | 2.00 | 0.90 | Weak Concordant | |||
| ARI1B_HUMAN | n/a | 3.03 | 2.00 | n/a | n/a | |||
| ZEB2_HUMAN | -1.35 | 2.44 | 1.67 | n/a | n/a | |||
| ZN629_HUMAN | -2.71 | 2.39 | 1.33 | n/a | n/a |
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Motif analysis
