ADASTRA v1.6.10
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rs12283429
chr11:124770375
T
>
C
Sequence
cccaggctggaatgcatgactcac[T/C]ggagctttgacctcccagactcaa
ASB in cell types
HT29 (colon adenocarcinoma)
coronary artery smooth muscle
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HT29 (colon adenocarcinoma)
1.50
-0.99
0.03
0.89
3.00
coronary artery smooth muscle
-0.73
0.99
1.00
0.04
1.33
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5
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Motif analysis
No data available
Genetic associations
GRASP
aortic valve calcium
,
body mass index (bmi)
,
college completion
,
homa-ir
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Artery_Tibial
,
Brain_Cortex
,
Cells_Cultured_fibroblasts
,
Heart_Left_Ventricle
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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