rs12332505 chr5:131001655 T>G
- Sequence
tgttccagccatccacgatgaggc[T/G]ccaggcatgcaagggaagaagcca
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NFIC_HUMAN ZN316_HUMAN EMSY_HUMAN MAFG_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIC_HUMAN | n/a | 2.94 | 2.00 | n/a | No Hit | |||
| ZN316_HUMAN | n/a | 2.61 | 2.00 | n/a | n/a | |||
| EMSY_HUMAN | n/a | 2.53 | 2.00 | n/a | n/a | |||
| MAFG_HUMAN | n/a | 2.35 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Spinal_cord_cervical_c-1, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid