rs12333513 chr7:68177172 G>C
- Sequence
tgcagtctcctctccgctttcccc[G/C]ccttggaattgctattggcctcta
- ASB in cell types
- A549 (lung carcinoma) MCF7 (Invasive ductal breast carcinoma) foreskin keratinocyte CD34+ hematopoietic stem cells
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN SMC3_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.21 | 0.06 | 1.86 | n/a | No Hit | |||
| RAD21_HUMAN | 1.42 | -0.15 | 1.89 | n/a | n/a | |||
| SMC3_HUMAN | 1.29 | -0.31 | 2.00 | n/a | n/a |
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