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rs12389474 chrX:54639855 G>C

Sequence
gaggagctccggtgagagtaacag[G/C]gtcggatttgtctgggccaggccc
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
ATF2_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ATF2_HUMAN 0.62 n/a 2.5·10-31.00 2.50 n/a No Hit
IKZF2_HUMAN 1.86 -1.45 8.8·10-31.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts Skin_Sun_Exposed_Lower_leg

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