rs1239182 chr17:38854255 C>T
- Sequence
gacccgtcccccccaacacacact[C/T]tttttttctttttttgagaccgag
- ASB in cell types
- HEK293 (embryonic kidney) GM12878 (female B-cells)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| HEK293 (embryonic kidney) | 0.59 | 0.59 | 1.68 | |||
| GM12878 (female B-cells) | -1.38 | 1.63 | 1.33 |
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