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rs12404234 chr1:235903213 C>T

Sequence
gaggtgagtcatgcattttatagg[C/T]gcagaaattgaaagaggagtgact
ASB in cell types
HEK293 (embryonic kidney) A549 (lung carcinoma)
ASB for transcription factors
ZN398_HUMAN ZIC2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN398_HUMAN 2.48 n/a 0.011.00 3.00 n/a n/a
ZIC2_HUMAN 2.13 n/a 0.041.00 3.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels advanced age-related macular degeneration (geographic atrophy) barnes akathisia rating scale major depressive disorder total cholesterol
GTEx eQTL Stomach Testis

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