rs12405063 chr1:59290420 A>T
- Sequence
tagggttgcatattgccatggctc[A/T]ttacatggtttgcagtttttaaaa
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma) foreskin keratinocyte
- ASB for transcription factors
- RFX1_HUMAN KDM1A_HUMAN STAT1_HUMAN FOXK2_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFX1_HUMAN | -1.03 | 1.68 | 2.00 | n/a | No Hit | |||
| KDM1A_HUMAN | -2.37 | 2.32 | 2.00 | n/a | n/a | |||
| STAT1_HUMAN | 1.73 | n/a | 2.50 | n/a | No Hit | |||
| FOXK2_HUMAN | 0.39 | 1.43 | 1.77 | n/a | n/a |
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