rs12410764 chr1:223707302 T>G
- Sequence
ctctctctctcactccctctctca[T/G]ttactcacaaggtcagtggcccag
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HT29 (colon adenocarcinoma) adrenal gland
- ASB for transcription factors
- CTCF_HUMAN NR1H3_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.12 | 1.08 | 1.22 | n/a | No Hit | |||
| NR1H3_HUMAN | -0.93 | 1.79 | 2.00 | n/a | No Hit | |||
| ESR1_HUMAN | 0.02 | 1.04 | 1.88 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Lung, Skin_Not_Sun_Exposed_Suprapubic, Thyroid, Whole_Blood