ADASTRA v1.6.10
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rs12419062
chr11:35228123
A
>
G
Sequence
gactcgtatatgtgtagtagtgat[A/G]tgttacaggaaagaggaagcattg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ATF4_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ATF4_HUMAN
1.90
n/a
0.04
1.00
2.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
fasting insulin
,
homa-b
,
homa-ir
,
hypertension (early onset hypertension)
,
ldl cholesterol
,
obesity with early age of onset (age >2)
,
paternal transmission distortion
,
salmonella-induced pyroptosis
,
total cholesterol
,
triglycerides
GTEx eQTL
Testis
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)