ADASTRA v1.6.10
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rs12421179
chr11:10091489
A
>
G
Sequence
ctaacaaagtacattattaagtat[A/G]attctgtacataaagaaagtgctc
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN
-0.27
1.63
1.00
6.0·10
-3
1.50
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
birth weight
,
cystatin c in serum
,
hdl cholesterol
,
microalbuminuria
,
obesity with early age of onset (age >2)
,
rheumatoid arthritis
,
serum creatinine
,
triglycerides
GTEx eQTL
Adipose_Visceral_Omentum
,
Cells_Cultured_fibroblasts
,
Esophagus_Muscularis
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)