rs12427 chr19:43766667 A>G
- Sequence
gtcccaccagggggcgccacctcc[A/G]gccccgccccagcctcatacccag
- ASB in cell types
- epidermal keratinocytes CD34+ hematopoietic stem cells
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.99 | 0.03 | 1.44 | -1.84 | Weak Concordant |
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Motif analysis
