rs12430601 chr13:41848611 G>A
- Sequence
aactccctcctgccacctagtgaa[G/A]gtgcctgcttctcctttgccttct
- ASB in cell types
- SUM159PT (pleiomorphic breast carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.04 | 1.36 | 1.29 | -0.07 | Weak Discordant |
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Motif analysis
