rs12433034 chr14:22557405 T>C
- Sequence
tcagacccgctccacccggagccc[T/C]ggaggaagtgcccagggagggctg
- ASB in cell types
- HEK293 (embryonic kidney) CD34+ stem cells-derived erythroblasts CD14+ monocytes lower leg skin
- ASB for transcription factors
- CTCF_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.90 | 0.25 | 1.40 | 0.24 | Weak Discordant | |||
| STAT1_HUMAN | 1.81 | -3.74 | 2.50 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Adrenal_Gland, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Whole_Blood