rs1243659 chr14:20613348 T>C
- Sequence
gaacggtatacagggacagcaaag[T/C]gcagtcgtgaagttttcaaacaag
- ASB in cell types
- HEK293 (embryonic kidney) HepG2 (hepatoblastoma) GM12878 (female B-cells) HEK293T (embryonic kidney)
- ASB for transcription factors
- ZN366_HUMAN FOXK2_HUMAN Z518A_HUMAN PKNX1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN366_HUMAN | 1.42 | n/a | 1.50 | n/a | n/a | |||
| FOXK2_HUMAN | 2.51 | 1.39 | 1.61 | n/a | n/a | |||
| Z518A_HUMAN | 2.10 | n/a | 1.50 | n/a | n/a | |||
| PKNX1_HUMAN | 2.22 | -1.89 | 2.00 | n/a | No Hit | |||
| SP130_HUMAN | -2.91 | 2.32 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP alzheimers disease, comorbid depressive syndrome and alcohol dependence, diastolic blood pressure (dbp), partial epilepsy