rs12445526 chr16:80576735 A>G
- Sequence
agtgatggtgatgatgatgatggt[A/G]atgataatggtgatgaagatggtg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HEK293 (embryonic kidney) K562 (myelogenous leukemia)
- ASB for transcription factors
- CREB1_HUMAN FOS_HUMAN CTBP1_HUMAN YBOX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREB1_HUMAN | 0.94 | n/a | 3.00 | n/a | No Hit | |||
| FOS_HUMAN | 2.72 | -3.34 | 1.50 | n/a | n/a | |||
| CTBP1_HUMAN | 2.41 | -0.84 | 1.75 | n/a | n/a | |||
| YBOX1_HUMAN | 2.20 | -2.62 | 1.50 | n/a | n/a |
Items per page:
1 – 4 of 4