rs12446 chr5:34831643 A>G
- Sequence
ttattggctcataaagatgttttc[A/G]tatctgaactcctaaataagtgaa
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.89 | 0.35 | 1.62 | -3.16 | Concordant |
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Motif analysis
