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rs12450996 chr17:82336233 G>A

Sequence
tctgtttaactctccaaattattc[G/A]gcagcatattcttaaaatccccaa
ASB in cell types
HEK293 (embryonic kidney) GM12878 (female B-cells)
ASB for transcription factors
IKZF2_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN -2.00 1.88 1.002.4·10-3 1.42 n/a n/a
IKZF1_HUMAN -0.76 1.44 1.000.02 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP moyamoya disease sporadic creutzfeldt-jakob disease
GTEx eQTL Brain_Cerebellum Cells_Cultured_fibroblasts Heart_Atrial_Appendage Prostate Skin_Not_Sun_Exposed_Suprapubic Spleen Testis Thyroid

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