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rs12452983 chr17:27473984 G>A

Sequence
gagaaaccaaaagccaaagacctc[G/A]tttactcacaatacctgtgtacag
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
MNT_HUMAN ARI1B_HUMAN TAL1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MNT_HUMAN 1.84 -0.26 0.011.00 2.00 n/a n/a
ARI1B_HUMAN 2.19 n/a 0.011.00 2.00 n/a n/a
TAL1_HUMAN 1.73 n/a 0.031.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd cystatin c in serum hdl cholesterol total cholesterol
GTEx eQTL Esophagus_Mucosa Lung Whole_Blood

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