rs12453366 chr17:14325980 T>C
- Sequence
cacccccttggaggactgctatag[T/C]agatggatagaggttatgatgact
- ASB in cell types
- LNCaP (prostate carcinoma) MCF7 (Invasive ductal breast carcinoma) VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.01 | 1.21 | 1.62 | n/a | No Hit | |||
| ESR1_HUMAN | 0.29 | 0.82 | 2.17 | n/a | No Hit |
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