rs12467885 chr2:62288176 G>A
- Sequence
tacaggagaaagggcaccacactg[G/A]gtgacagagcagctagtttcagga
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- NFIC_HUMAN NR2C1_HUMAN KDM1A_HUMAN FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIC_HUMAN | n/a | 0.37 | 2.00 | n/a | No Hit | |||
| NR2C1_HUMAN | -2.08 | 1.85 | 2.00 | n/a | No Hit | |||
| KDM1A_HUMAN | -1.77 | 2.28 | 2.00 | n/a | n/a | |||
| FOXK2_HUMAN | 1.41 | n/a | 1.33 | n/a | n/a | |||
| ATF3_HUMAN | -1.71 | 1.92 | 2.00 | n/a | No Hit |
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