rs12477132 chr2:140611726 C>G
- Sequence
ttatgtaaataaagcttatttact[C/G]tctcatattttaaaaaccatttga
- ASB in cell types
- HepG2 (hepatoblastoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA2_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | n/a | 2.61 | 2.00 | -1.23 | Weak Discordant | |||
| FOXA1_HUMAN | -0.43 | 1.42 | 2.00 | -1.21 | Weak Discordant |
Items per page:
1 – 2 of 2
Motif analysis
