rs12482507 chr21:14116378 C>T
- Sequence
cttcacagcagtagttgggtgtga[C/T]ctggccaagcagcacccaaacctc
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- IKZF2_HUMAN MEF2B_HUMAN ZN687_HUMAN IKZF1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | 1.78 | -2.14 | 1.42 | n/a | n/a | |||
| MEF2B_HUMAN | 1.80 | -2.10 | 1.50 | n/a | No Hit | |||
| ZN687_HUMAN | 2.00 | -2.47 | 1.50 | n/a | n/a | |||
| IKZF1_HUMAN | 1.29 | -1.05 | 1.42 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia, Brain_Substantia_nigra, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Testis