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rs12485547 chr3:182716759 A>G

Sequence
gatacctgcaagccatttaaatgg[A/G]ttgtgctattgtaagtgggtgtat
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
PRD10_HUMAN FOXK2_HUMAN ATF7_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PRD10_HUMAN 2.24 n/a 6.7·10-111.00 1.33 n/a n/a
FOXK2_HUMAN 1.32 -1.59 0.021.00 1.33 n/a n/a
ATF7_HUMAN 1.85 -1.65 0.041.00 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol total cholesterol triglycerides change with statins
GTEx eQTL Esophagus_Mucosa Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Stomach

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