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rs12493140 chr3:15816083 G>A

Sequence
tcacgagcgtatttctgactgatt[G/A]aaaaccgccttctgttactatggc
ASB in cell types
HEK293 (embryonic kidney) OCI-LY7 (diffuse large B-cell lymphoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.60 0.42 0.020.86 1.13 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP coronary artery disease (cad), gender differentiated infant head circumference rheumatoid arthritis simpson-angus scale
GTEx eQTL Adipose_Subcutaneous Brain_Cerebellar_Hemisphere Brain_Cerebellum Skin_Not_Sun_Exposed_Suprapubic Spleen Testis Thyroid Whole_Blood

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