rs12493734 chr3:5057895 A>G
- Sequence
tacacatagtctacgtcttgcaac[A/G]aaacaagtttttggtgtctgcaag
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- RAD21_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.45 | 0.09 | 1.90 | n/a | n/a | |||
| SMC3_HUMAN | 1.23 | -0.18 | 1.83 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP asthma, autism, autism without verbal ability, microalbuminuria, urinary albumin-to-creatinine ratio