rs12500887 chr4:139189280 C>G
- Sequence
ctctctttaattaacttgctgagt[C/G]agggcaggaggcaagcaaactagt
- ASB in cell types
- K562 (myelogenous leukemia) monocyte-derived dendritic cells CD14+ monocytes periferal blood macrophages
- ASB for transcription factors
- ARI1B_HUMAN IKZF1_HUMAN SPI1_HUMAN PKNX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ARI1B_HUMAN | 2.87 | n/a | 2.00 | n/a | n/a | |||
| IKZF1_HUMAN | 1.33 | n/a | 2.00 | n/a | No Hit | |||
| SPI1_HUMAN | 2.46 | -0.64 | 1.83 | n/a | No Hit | |||
| PKNX1_HUMAN | 2.73 | n/a | 2.00 | n/a | No Hit | |||
| PRD10_HUMAN | 2.91 | n/a | 2.00 | n/a | n/a |
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Motif analysis
