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rs12520518 chr5:54489404 C>A

Sequence
catcaaataaagctgattaaccag[C/A]ttgatttgaaacttatttctactt
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
RAD21_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN 0.74 -0.20 0.010.97 1.93 n/a n/a
CTCF_HUMAN 0.55 0.46 0.040.25 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP diabetic retinopathy in type 2 diabetes mellitus
GTEx eQTL Artery_Aorta Artery_Tibial Colon_Sigmoid Nerve_Tibial Prostate

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