rs12523012 chr5:35305478 C>G
- Sequence
tcaggatagaataggcaggacaaa[C/G]agaatttccttcttcacaaaaggc
- ASB in cell types
- T47D (invasive ductal carcinoma)
- ASB for transcription factors
- PRGR_HUMAN FOXA1_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PRGR_HUMAN | 2.48 | -2.11 | 1.83 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.72 | 0.08 | 1.50 | -3.96 | Concordant | |||
| ESR1_HUMAN | 1.84 | -1.57 | 1.50 | n/a | No Hit |
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Motif analysis
