rs12531101 chr7:112450224 C>T
- Sequence
gggaagagacggctgggaggaggc[C/T]ccggccccagccttactacgtttc
- ASB in cell types
- HEK293 (embryonic kidney) GM12878 (female B-cells) LNCaP (prostate carcinoma)
- ASB for transcription factors
- HCFC1_HUMAN ZN341_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HCFC1_HUMAN | 1.82 | -1.77 | 1.00 | n/a | n/a | |||
| ZN341_HUMAN | n/a | 2.17 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Liver, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Spleen, Stomach, Testis, Thyroid, Whole_Blood