rs12533520 chr7:75843131 A>G
- Sequence
cttatatgcaaaacaaccctaagt[A/G]tagaaggagccaagaaaccaaaga
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells) A549 (lung carcinoma) tibial nerve
- ASB for transcription factors
- MEF2B_HUMAN EP300_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEF2B_HUMAN | 1.89 | -2.15 | 1.33 | n/a | No Hit | |||
| EP300_HUMAN | 1.10 | 2.39 | 1.61 | n/a | n/a | |||
| STAT1_HUMAN | 0.82 | -3.06 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Heart_Atrial_Appendage, Lung, Nerve_Tibial, Ovary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen